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TF-YS: A guide to conducting research in laboratory medicine

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The aim of the “A guide to conducting research in laboratory medicine” is to provide insight into the research process and to provide an overview of the strengths and weaknesses of different research methods for young scientists at various levels of their profession and career.

The Guide is downloadable as an e-booklet, as separate chapters or as a series of webinars that are accessible via the IFCC eAcademy using the following links:

Click here to download the full e-book or to access the single Chapters

Click here to access to the e-Academy webinars

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XII IFCC General Conference 2016 Madrid – Spain

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The aim of the IFCC General Conference is to convene all the IFCC functional units at one time and location, in order to discuss present activities and projects, and to plan and decide on future actions of the organisation.

Click here to donwload the IFCC General Conference Programme

More Information: IFCC

Zika Virus as a Cause of Neurologic Disorders

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Zika virus infections have been known in Africa and Asia since the 1940s, but the virus’s geographic range has expanded dramatically since 2007. Between January 1, 2007, and March 1, 2016, local transmission was reported in an additional 52 countries and territories, mainly in the Americas and the western Pacific, but also in Africa and southeast Asia. Zika virus infections acquired by travelers visiting those countries have been discovered at sites worldwide. Aedes aegypti mosquitoes are the principal vectors, though other mosquito species may contribute to transmission. The virus was found to be neurotropic in animals in experiments conducted in the 1950s, and recent experiments have shown how it can cause neural-cell death. A rise in the incidence of Guillain–Barré syndrome, an immune-mediated flaccid paralysis often triggered by infection, was first reported in 2013 during a Zika outbreak in French Polynesia. An increase in the incidence of microcephaly, a clinical sign that can be caused by underdevelopment of the fetal brain, was first reported in northeastern Brazil in 2015, after Zika virus transmission had been confirmed there. These reports of excess cases of Guillain–Barré syndrome and microcephaly led the World Health Organization (WHO) to declare a Public Health Emergency of International Concern on February 1, 2016, and to recommend accelerated research into possible causal links between Zika virus and neurologic disorders.1

As researchers investigate whether and by what mechanisms Zika virus infections could affect the nervous system, there is a key question for public health: How can currently available evidence about causality guide the choice and implementation of interventions? For this purpose, the WHO is developing a framework for the systematic appraisal of evidence about these causal relationships. How does the available evidence inform current WHO recommendations, and what are the priorities for research going forward?

Besides advancing scientific understanding, the main practical purpose of investigating causality is to evaluate, as accurately as possible, what reduction in the incidence of illness (here, especially neurologic disorders) can be expected from reducing human exposure to the putative cause (Zika virus infection). The conceptual framework is based on factors first proposed by Bradford Hill and commonly used to assess causality: temporality (cause precedes effect), biologic plausibility of causal mechanisms, consistency (same association found in different studies and populations), strength of association (as measured by risk ratio, rate ratio, or odds ratio in cohort or case–control studies), exclusion of alternative explanations, dose–response relationship, cessation (removing the supposed cause reverses the effect), and analogy to cause-and-effect relationships in other diseases.2 Temporality is the single necessary condition; none of the factors on its own is sufficient.

Causal relationships cannot be proven with absolute certainty in epidemiologic studies, but these factors help analysts judge the existence and strength of possible causal links. Their assessment should be complemented by controlled experiments, the most robust approach to drawing inferences about cause and effect.

A systematic strategy for identifying relevant evidence will enable a transparent and replicable approach that can be updated to capture new information. Study methods can be assessed for risks of selection and measurement bias, confounding, and the effect of chance. To illustrate the approach, we conducted a search of PubMed and selected journal and public health websites for information posted through March 4, 2016. The table and the Supplementary Appendix (available with the full text of this article at NEJM.org) provide a preliminary summary of population- and individual-level studies on possible associations between Zika virus infection and Guillain–Barré syndrome or microcephaly.

We found three published reports on Guillain–Barré syndrome studied at the population level. During the 2013–2014 outbreak in French Polynesia, the rise and fall of Zika virus infections was followed by a similar rise and fall in the incidence of Guillain–Barré syndrome, with a delay of about 3 weeks.3In the Americas, Guillain–Barré syndrome in the presence of Zika virus has now been reported to the WHO from Brazil, Colombia, El Salvador, Martinique, Panama, Puerto Rico, Suriname, and Venezuela, but we found no reports from these countries linking the syndrome with trends in Zika virus infections.

One study of microcephaly showed a higher-than-expected incidence in the state of Paraíba, Brazil, during the period when Zika transmission began, but data on the timing of Zika infections were not available (see table). In the state of Bahia, Brazil, an outbreak of cases of acute rash, suspected to be Zika virus disease, was followed by an increase in cases of microcephaly. Additional surveillance data describing the temporal relationship between Zika infections and neurologic disorders are likely to be published soon. Some recent epidemiologic observations invite further investigation: microcephaly has been reported in association with Zika infection in Brazil, but not yet in neighboring countries, perhaps because it is still too soon after the introduction of the virus. An outbreak of Zika virus infection in Cape Verde during 2015–2016 involving thousands of cases and possibly caused by an African strain of the virus has not been linked to any neurologic disorders.4

At the level of individual patients, we found 3 studies on Guillain–Barré syndrome and 14 on microcephaly. The only published case–control study showed, among other results, that 41 of 42 patients with Guillain–Barré syndrome diagnosed during the 2013–2014 outbreak in French Polynesia (98%) were carrying Zika virus antibodies, as compared with 35 of 98 hospitalized controls (odds ratio, 59.7; 95% confidence interval, 10.4 to ∞).3 Serologic tests excluded some other infectious triggers for Guillain–Barré syndrome, and there was no association between the syndrome and exposure to dengue, which has the same mosquito vector and was circulating at the same time as the Zika virus outbreak.

One prospective study has compared ultrasound findings in pregnant women with confirmed Zika virus disease and in women with rash apparently from other causes (see table). Ultrasound findings were abnormal, including indications of microcephaly, in 12 of 42 women with Zika virus disease and were normal in all 16 women with no Zika virus disease. Eleven other reports, published between November 2015 and February 2016, involved a total of 93 neonates or fetuses with microcephaly, all in, or linked to, Brazil. In 9 of the 93 cases, Zika infection was detected in fetal or neonatal brain tissue or in amniotic fluid. In 4 cases, Zika virus was found in the brain but not in other organs on postmortem examination. In most case reports or case series, other infections and toxic exposures known to cause microcephaly were not completely excluded. One additional report compiled after the Zika virus outbreak in French Polynesia identified 17 cases of fetal or neonatal brain malformations, which included a number of cases of microcephaly.

The prevailing uncertainty about Zika virus infection and its consequences is now driving a vigorous program of research. One case–control study of Guillain–Barré syndrome and one cohort study of pregnant women described above provide evidence for a causal link. However, most of the data summarized here derive from studies whose designs are typically classified as weak, and the data are not entirely consistent. The available data are mainly observations regarding temporal associations between infection and disease from routine population surveillance and clinical and pathological studies of single cases or groups of cases. Such data are essential for the discovery of new phenomena and as a source of testable hypotheses about cause and effect,5 but a more comprehensive approach to causality is needed. The WHO framework will set out research questions to address the various dimensions of causality as they apply to Zika virus and neurologic disorders and will ensure a systematic review of the literature to synthesize the evidence. Further case–control and cohort studies are already under way to fill critical knowledge gaps.

Even with limited evidence linking Zika virus to neurologic disorders, the severe potential risks demand decisive, immediate action to protect public health. The WHO recommends applying key interventions such as intensive mosquito control; personal protection against mosquito bites; provision of appropriate clinical care for all patients with Guillain–Barré syndrome and for women before, during, and after pregnancy; and prevention of Zika virus transmission through sexual contact or blood transfusion.4 Most of these are not new interventions, but they do need strengthening. Populations must be informed of the potential current and future risks of neurologic disorders, wherever the virus is being or could be locally transmitted and in other regions inhabited by the mosquito vectors. As the putative link between Zika virus and neurologic disorders is reinforced, refined, or even refuted, public health measures will be adjusted accordingly.

Author: Nathalie Broutet, M.D., Ph.D., Fabienne Krauer, M.Sc., Maurane Riesen, M.Sc., Asheena Khalakdina, Ph.D., Maria Almiron, M.Sc., Sylvain Aldighieri, M.D., Marcos Espinal, M.D., Nicola Low, M.D., and Christopher Dye, D.Phil.
March 9, 2016DOI: 10.1056/NEJMp1602708

Disclosure forms provided by the authors are available with the full text of this article at NEJM.org.

This article was published on March 9, 2016, at NEJM.org.

Source: The New England Journal of Medicine

IFCC welcomes KBUD, the new Affiliate member from Turkey

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The IFCC is happy to announce its 11th Affiliate member, the Society of Clinical Biochemistry Specialists (KBUD), from Turkey. The mission of KBUD is to promote the professional recognition of the clinical laboratory, to contribute to the training and scientific knowledge of members, and to contribute to continuous training of Turkish laboratory professionals with diverse organizations through seminars, conferences andnational/international congresses.

KBUD, the Society of Clinical Biochemistry Specialists, was founded in 1999 in Istanbul and its members work in the field of Clinical Biochemistry.

The aim of KBUD and the areas of activities are as follows:

  • To promote the science of Clinical Biochemistry in our country and to assist and enlighten all related establishments regarding health problems in our country.
  • To promote scientific activities and the unity of members in the society.
  • To help the formation of scientific developments in the field of Clinical Biochemistry in the country and to encourage members to report and publish their achievements and relevant studies.
  • To organize scientific meetings in cooperation with local, national and international organizations.
  • To support every aspect of the professional activities of society members.

To learn more about KBUDt: www.kbud.org.tr/

Zika Virus: New Clinical Syndromes and its Emergence in the Western Hemisphere

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Zika virus (ZIKV) had remained a relatively obscure flavivirus until a recent series of outbreaks accompanied by unexpectedly severe clinical complications brought this virus into the spotlight as an infection of global public health concern. In this review, we discuss the history and epidemiology of ZIKV infection, recent outbreaks in Oceania and the emergence of ZIKV in the Western Hemisphere, newly ascribed complications of ZIKV infection including Guillain- Barré syndrome and microcephaly, potential interactions between ZIKV and dengue virus, and the prospects for the development of antiviral agents and vaccines.

Author: Helen M. Lazear1 and Michael S. Diamond2

  1. Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599.
  2. Departments of Medicine, Molecular Microbiology, Pathology &  Immunology, and The Center for Human Immunology and Immunotherapy Programs,  Washington University School of Medicine, St Louis, MO 63110.

Click here to download the newly-published review from the Journal of Virology.

Focal vs. Diffuse Hyperinsulinism’s Patients: Comparing Outcomes

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Hyperinsulinism (HI) occurs in two forms: diffuse and focal. In the diffuse form, all beta cells in the pancreas are affected and overproduce insulin. In the focal form, a single mass of beta cells overproduce insulin. The diffuse form, when not responsive to medical therapy, is treated with a near-total pancreatectomy. In contrast, the focal form can be cured by surgically removing the lesion. Distinguishing between the two forms is very important, because the treatments and outcomes are different. Doctors can distinguish between the two forms using genetic testing and imaging with a specialized PET scan. However, the specialized PET scan is only available in a few centers worldwide, including the Congenital Hyperinsulinism Center at The Children’s Hospital of Philadelphia.

Researchers at CHOP’s HI Center conducted a research study comparing the clinical features, treatments and short-term outcomes of children with HI who underwent pancreatectomies from 2004 to 2012. During this period, 223 children underwent surgery at CHOP: 44 percent with diffuse HI, 51 percent with focal HI and 5 percent with other/undetermined disease.

The study looked for clinical differences between patients with diffuse disease and those with focal HI. Researchers found that children with diffuse HI had heavier birth weights and were born on average one week earlier than those with focal HI. Children with focal HI were less likely to be identified with HI prior to discharge home after birth. They were identified at an older age than those with diffuse HI, and they were also more likely to have seizures. Children with diffuse HI had higher insulin levels and needed more aggressive medical treatment with dextrose and glucagon infusions than those with focal HI.

Children with diffuse HI required on average 98 percent of their pancreas surgically removed, and 40 percent required continued treatment for hypoglycemia after surgery. In contrast, children with focal HI required on average 27 percent of their pancreas surgically removed, and 94 percent of the children required no additional blood sugar treatments after surgery. This study, which was published in November 2013 issue of The Journal of Clinical Endocrinology & Metabolism, showed that there are clinical differences between children with diffuse and focal HI. The correct diagnosis must still be confirmed through genetic testing and imaging studies.

Sourcewww.chop.edu

A new issue of CCLM is available online! Vol 54, Issue 4 April 2016

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A new issue of ‘Clinical Chemistry and Laboratory Medicine (CCLM)’ is available online from De Gruyter Online

Vol 54, Issue 4 April 201

Click here to see the future titles of Clin Chem Lab Med

EFLM e-seminar “5 ways how to use e-learning in laboratory medicine effectively”

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Invitation to the EFLM e-seminar “5 ways how to use e-learning in laboratory medicine effectively”

Speaker: Daniel Rajdl (CZ) – Moderator: Elizabeta Topic (HR)

Date: Tuesday, March 15, 2016 at 18:00 CET

Registration at: https://www.surveymonkey.com/r/eflm20161 (participation free of charge – limited number of seats)

Click here to access the webinar room (available 1 hour before the webinar)

If used properly, e-learning can be an effective tool to share our expertise with colleagues and patients. This e-seminar is a good opportunity for your National Society to learn more on how to plan a successful e-learning programme for your members.

Laboratory medicine is in the intersection between clinicians, laboratory science and patients. E-learning offers a broad variety of tools that can bridge information gap between these worlds. In this interactive webinar, we will cover following objectives:

  • Overview of basic tools used in e-learning
  • Familiarize attendants with 5 commonly used ways of delivering content by e-learning (webinar, voice-over presentation, quiz, user generated content + social media, e-book)
  • Give examples and practical hints for creating attractive educational materials

Daniel Rajdl is current Chair of the EFLM Working Group for Distance Education and e-Learning. He was and is a principal coordinator of several larger e-learning projects (E-clinical biochemistry, BioHema, CEVA). His main pedagogical interests are webinars and effective presentation.

Click here to check if your system meets the minimum requirements to attend the meeting

 

New EFLM event: Course “Developing medical tests that improve patient outcomes”

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Secure your space at a Course delivered by the EFLM Test Evaluation Working Group!

Keynote Speakers: Rita Horvath, Patrick Bossuyt , Sverre Sandberg, Sally Lord, Christoph Ebert, Phillip J Monaghan, Andrew St John, and others

Developing medical tests that improve patient outcomes.

Date: 9-11 November, 2016 – Leiden, Netherlands

Laboratory medicine has a poor record bringing new tests to market in a timely and effective way.

Evidence based laboratory medicine (EBLM) provides the underlying principles for how a new biomarker should go through the test evaluation process but these principles alone do not appear to have guided better evaluation. This course aims to address that gap by extending the principles of EBLM to provide some practical tools for the key processes of test evaluation.

Key Features of 2½ day course:

  • The course will be interactive and talks by keynote speakers will be followed by practical assignments.
  • Test evaluation – definitions and basic concepts
  • Tools to conduct test evaluation including:
  • Talks to highlight the differing perspectives and experience of key stakeholders and experts in test evaluation
  • Practical assignments to understand the use of test evaluation tools.

Target Audience:

  • Qualified laboratory professionals
  • Researchers involved in biomarker development and test evaluation
  • Clinicians involved in biomarker use and evaluation in clinical practice
  • Healthcare company and regulatory representatives

For further information, visit the course website at: http://www.eflm-test-evaluation-course.eu/go/home

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