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New research identifies drug target for dengue virus

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Now a team of Dutch investigators has data suggesting that a protein in dengue virus that goes by the scientific name, NS4B, would make a promising target for antiviral drug development. The research is published in Antimicrobial Agents and Chemotherapy, a journal of the American Society for Microbiology.

More specifically, the team found that a metabolite of the common pain reliever, acetaminophen, called AM404, inhibits Dengue virus from replicating. They identified AM404 as a potential antiviral agent by screening the National Institutes of Health Clinical Collection, a library of small molecules that have been used clinically in humans, using a high-throughput screening system.

The team was able to determine when replication was being inhibited because they used a derivative of dengue virus that expresses luciferase, a molecule that produces bioluminescence, during replication, said corresponding author Ronald van Rij, PhD, associate professor in the Department of Medical Microbiology, Radboud University Medical Center, Nijmegen, the Netherlands. “This system provides an easy and rapid read-out of virus replication, and is therefore very useful for screening purposes,” said van Rij.

In an effort to identify mutations that would render dengue virus insensitive to AM404–thereby identifying the compound’s target, the researchers tried to generate resistance mutations by culturing the virus in the presence of AM404. “This is a typical approach to generate resistance mutations,” said van Rij. However, these attempts failed.

Next, the researchers tested three dengue virus mutants that had proven resistant to other antiviral compounds for cross-resistance to AM404. “Surprisingly, all three amino acid substitutions rendered [dengue virus] insensitive to AM404, whereas the mutants remained sensitive to ribavirin [another antiviral compound],” the researchers wrote. “These mutations are located in the viral NS4B protein, indicating that aNS4B is the direct or indirect target of AM404.

Like Zika virus, Dengue is transmitted by the mosquito, Aedes aegypti. Dengue, called break bone fever, is notable for causing severe bone and muscle pain, headache, and pain behind the eyes. It is also linked with severe vomiting, red spots or patches on the skin, difficulty breathing, and dark, tarry stools, according to the Centers for Disease Control and Prevention. It causes an estimated 100 million clinical cases worldwide, annually, and roughly half of the world’s population is at risk, including southernmost regions of the United States, such as Florida, Texas, and Hawaii, according to the World Health Organization. About 2.5 percent of those infected die, although early detection and treatment can reduce mortality to around one percent.

Unfortunately, AM404’s antiviral activity against dengue is rather modest, said van Rij. “However, insights into the mechanism behind AM404’s antiviral activity will teach us a lot about the infection.”

The American Society for Microbiology is the largest single life science society, composed of over 47,000 scientists and health professionals. ASM’s mission is to promote and advance the microbial sciences.

ASM advances the microbial sciences through conferences, publications, certifications and educational opportunities. It enhances laboratory capacity around the globe through training and resources. It provides a network for scientists in academia, industry and clinical settings. Additionally, ASM promotes a deeper understanding of the microbial sciences to diverse audiences.

Source: ASM

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Biomarker tests for molecularly targeted therapies need better evidence, oversight

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To enhance patient care and clinical outcomes, the report calls for the creation of a “rapid learning system” that would integrate research on these tests and associated treatments with clinical practice. Appropriate regulatory oversight is also needed to ensure that biomarker tests and targeted therapies are accurate, reliable, and properly validated and implemented.

Biomarker tests for molecularly targeted therapies identify molecular variations specific to an individual patient, which can help determine the most effective therapy for a patient’s disease or avoid treatments that could be ineffective or harmful. Advances in research over the past 15 years have led to hundreds of molecularly targeted agents entering the drug development pipeline; numerous biomarker tests and associated therapies have been approved for clinical use in treating cancer and other diseases. However, progress has been hampered by regulatory and reimbursement uncertainties, clinical practice challenges, and limitations in data collection and analysis.

“The timely development of biomarker tests and associated therapies is critical to realizing the full potential of ‘precision medicine,'” said Harold L. Moses, chair of the committee that wrote the report, and Ingram Professor of Cancer Research, professor of medicine, pathology, microbiology, and immunology, and chair of the department of cancer biology at Vanderbilt University. “Our report lays out a strategy to ensure that patients have access to effective tests and treatments that are based on solid evidence of their ability to improve health outcomes.”

The committee identified 10 goals to advance the development and appropriate clinical use of biomarker tests for molecularly targeted therapies. First and foremost, the U.S. Department of Health and Human Services should immediately facilitate the development of common evidentiary standards that demonstrate the usefulness of biomarker tests for selecting targeted therapies and improving patient outcomes, the report says. These standards would inform regulatory, insurance coverage, and reimbursement decisions, and they could also strengthen clinical guidelines and standards of care. To develop and continuously update the standards as new information becomes available, HHS will need ongoing input from a wide variety of stakeholders, including patients, health care providers, test developers, pharmaceutical companies, and relevant government agencies. HHS should also facilitate collaboration between the U.S. Food and Drug Administration and the Centers for Medicare and Medicaid Services to enable more coordinated, transparent regulatory and reimbursement decisions.

Generating evidence of the overall clinical benefit of any biomarker test should be viewed as a continuous process, the report says. CMS and private insurance companies should develop payment models to support ongoing data collection on tests and associated therapies. Currently, data on biomarker tests and patient outcomes are not collected or shared in a way that can inform clinical practice. Electronic health records and laboratory information systems should facilitate the collection of patient data in real time, including information about tests, treatments, and outcomes. A national database should be created to capture these data to help health care providers and patients make evidence-based decisions about tests and treatment. In addition, the processes for developing and updating clinical practice guidelines for the effective use of biomarker tests for molecularly targeted therapies should be improved so that new data are incorporated and a broader base of interdisciplinary expertise is involved, the report says.

Some patients may face challenges in obtaining access to biomarker tests and therapies because of economic, ethnic, cultural, or geographic barriers. The report calls for research on how to provide equitable access to biomarker tests and targeted treatments. And to empower patients and their health care providers to make informed decisions, the FDA should develop patient- and provider-friendly standardized labels and additional information about tests’ performance, evidence, and uses.

Oversight and accreditation of laboratories providing biomarker tests for molecularly targeted therapies should also be updated and strengthened, the report says. Current regulatory oversight of these labs is widely viewed as insufficient for increasingly complex biomarker tests. And professional organizations and health care institutions should develop and implement standards for obtaining patient specimens to ensure patient safety as well as the accuracy of biomarker test results.

The study by the Institute of Medicine of the National Academies of Sciences, Engineering, and Medicine was sponsored by the American Society for Radiation Oncology, American Society of Clinical Oncology, Breast Cancer Research Foundation, Centers for Disease Control and Prevention, College of American Pathologists, Gilead Sciences, Janssen Diagnostics, National Cancer Institute, Novartis, Pfizer, Quest Diagnostics, and Susan G. Komen. The Academies are private, nonprofit institutions that provide independent, objective analysis and advice to the nation to solve complex problems and inform public policy decisions related to science, technology, and medicine. The Academies operate under an 1863 congressional charter to the National Academy of Sciences, signed by President Lincoln. A committee roster follows.

Source: nas.edu

Blood test may give early warning of skin cancer relapse

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Scientists from the Cancer Research UK Manchester Institute studied the DNA shed by tumours into the bloodstream – called circulating tumour DNA – in blood samples from seven advanced melanoma patients at The Christie NHS Foundation Trust.

In this early work they found they could see whether a patient was relapsing by tracking levels of circulating tumour DNA. And they found that new mutations in genes like NRAS and PI3K appeared, possibly causing the relapse by allowing the tumour to become resistant to treatment.

Most melanoma patients respond to treatment at first but their cancer can become resistant within a year. It is hoped that these approaches will allow doctors to use circulating tumour DNA to tailor treatment for individual patients to get the best result.

Around 40 to 50 per cent of melanoma patients have a faulty BRAF gene** and they can be treated with the targeted drugs vemurafenib or dabrafenib. But for many of these patients the treatments don’t work, or their tumours develop resistance after a relatively short time. When this happens these patients can be offered immunotherapy drugs including pembrolizumab, nivolumab and ipilimumab. Detecting this situation early could be key to improving their care and chances of survival.

Around 14,500 people are diagnosed with melanoma and more than 2,100 people die from it every year in the UK ***. Professor Richard Marais, lead author and Cancer Research UK’s skin cancer expert, said: “Being able to spot the first signs of relapse, so we can rapidly decide the best treatment strategy, is an important area for research. Using our technique we hope that one day we will be able to spot when a patient’s disease is coming back at the earliest point and start treatment against this much sooner, hopefully giving patients more time with their loved ones. Our work has identified a way for us to do this but we still need to test the approach in further clinical trials before it reaches patients in the clinic.”

Professor Peter Johnson, Cancer Research UK’s chief clinician, said: “One of the sinister things about melanoma is that it can lay dormant for years and then suddenly re-emerge, probably as it escapes from the control of the body’s immune system. Being able to track cancers in real time as they evolve following treatment has huge potential for the way we monitor cancers and intervene to stop them growing back. There’s still some time until we see this in the clinic but we hope that in the future, blood tests like these will help us to stay one step ahead in treating cancer.”

The research was funded by Cancer Research UK and the Wellcome Trust.

For media enquiries contact Emily Head in the Cancer Research UK press office on 020 3469 6189 or, out of hours, on 07050 264 059.

Notes to editor:

* Girotti et al. Application of sequencing, liquid biopsies and patient-derived xenografts for personalised medicine in melanoma. Cancer Discovery.

** http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4306428/

*** Number of new cases diagnosed and number of deaths from malignant melanoma (ICD10 C43) in the UK in 2013

About the Wellcome Trust

The Wellcome Trust is a global charitable foundation dedicated to improving health. We support bright minds in science, the humanities and the social sciences, as well as education, public engagement and the application of research to medicine.

Our investment portfolio gives us the independence to support such transformative work as the sequencing and understanding of the human genome, research that established front-line drugs for malaria, and Wellcome Collection, our free venue for the incurably curious that explores medicine, life and art. http://www.wellcome/ac/uk

About the Cancer Research UK Manchester Institute

The Cancer Research UK Manchester Institute is a research institute within The University of Manchester, and is core-funded by Cancer Research UK. Research at the Institute spans the whole spectrum of cancer research, from programmes investigating the molecular and cellular basis of cancer to those focused on translational research and the development of novel therapeutic approaches.

About Cancer Research UK

* Cancer Research UK is the world’s leading cancer charity dedicated to saving lives through research.
* Cancer Research UK’s pioneering work into the prevention, diagnosis and treatment of cancer has helped save millions of lives.

* Cancer Research UK receives no government funding for its life-saving research. Every step it makes towards beating cancer relies on every pound donated.

* Cancer Research UK has been at the heart of the progress that has already seen survival in the UK double in the last forty years.

* Today, 2 in 4 people survive their cancer for at least 10 years. Cancer Research UK’s ambition is to accelerate progress so that 3 in 4 people will survive their cancer for at least 10 years within the next 20 years.

* Cancer Research UK supports research into all aspects of cancer through the work of over 4,000 scientists, doctors and nurses.

* Together with its partners and supporters, Cancer Research UK’s vision is to bring forward the day when all cancers are cured.

Source: Eurekalert.org

Genetically inherited high cholesterol twice as common as believed

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The condition, familial hypercholesterolemia (FH), leads to severely elevated cholesterol levels from birth and is a leading cause of early heart attack.

“It’s more common than we thought and it’s important to look for it at a young age because someone with FH may have no symptoms until there is serious heart disease. A common story might be someone who develops chest pain or has a heart attack in their 30s or 40s — even though they look healthy, eat well, and are thin and fit,” said Sarah de Ferranti, M.D., M.P.H., lead author of the study, assistant professor of pediatric cardiology at Harvard Medical School, and director of preventive cardiology at Boston Children’s Hospital in Massachusetts.

Based on studies conducted outside of the United States in selected and less racially and ethnically diverse populations, prior to this research it was thought that FH affected about 1 in 500 adults. The current study used data from 36,949 adults who took part in the 1999-2012 National Health and Nutrition Examination Survey (NHANES) and extrapolated to the 210 million U.S. adults aged 20 years and older. Researchers used high levels of low-density-lipoprotein cholesterol (considered “bad” because it contributes to plaque buildup in arteries) and early heart disease in a person or close relative to determine probable/definite cases of FH.

Among the findings:

  • An estimated 834,500 U.S. adults may have FH;
  • Men and women are affected equally;
  • There are racial differences, with FH estimated to affect 1 in 249 whites, 1 in 211 blacks, and 1 in 414 Mexican Americans;
  • The clinical picture of FH varies by age and weight. For example, this NHANES analysis suggests that FH becomes more common with increasing age (affecting 1 in 1,557 people in their 20s, but 1 in 118 people in their 60s) and with obesity (affecting 1 in 172 obese people, but 1 in 325 non-obese people).

“The fact that FH varies by age and obesity shows that there are other factors at play in raising LDL-cholesterol levels in addition to genetics,” de Ferranti said, who noted a lack of genetic information in NHANES as a limitation to the study.

“The next step forward could be to take blood samples from a data set such as NHANES and look for the prevalence of FH genetic mutations and the heart attack rate,” she said.

If diagnosed at a young age, treatments such as statin medications can be started to reduce LDL levels and the risk of heart disease. Control of other risk factors, such as smoking, high blood pressure, as well as lack of exercise, poor diet and increased body weight, are particularly important for people with FH.

“If you’re born with FH you have lifelong exposure to high cholesterol, making your heart attack risk similar to someone decades older,” de Ferranti said. “If you know that somebody has had an early heart attack in your family, consider asking for everyone to be checked.”

A scientific statement by the American Heart Association, published December 1, 2015 in Circulation, states FH is “underdiagnosed and undertreated worldwide,” and proposed an ambitious research agenda to help meet the unique challenges FH poses for patients, families, and healthcare providers.

Co-authors are Angie Mae Rodday, Ph.D., M.S.; Michael M. Mendelson, M.D., S.M.; John B. Wong, M.D.; Laurel K. Leslie, M.D., M.P.H. and R. Christopher Sheldrick, Ph.D. Author disclosures are on the manuscript.

The Patient-Centered Outcomes Research Institute and the Tommy Kaplan Fund funded the study.

Additional Resources:

Researcher photo and cholesterol images are located in the right column of this release linkhttp://newsroom.heart.org/news/genetically-inherited-high-cholesterol-twice-as-common-as-believed?preview=384cc44b26d1022f80d75224fc1eba2e

After March 14, view the manuscript online here.

See Children and Cholesterol for more information

Follow AHA/ASA news on Twitter @HeartNews.

For updates and new science from the Circulation journal follow @CircAHA.

Statements and conclusions of study authors published in American Heart Association scientific journals are solely those of the study authors and do not necessarily reflect the association’s policy or position. The association makes no representation or guarantee as to their accuracy or reliability. The association receives funding primarily from individuals; foundations and corporations (including pharmaceutical, device manufacturers and other companies) also make donations and fund specific association programs and events. The association has strict policies to prevent these relationships from influencing the science content. Revenues from pharmaceutical and device corporations are available at http://www.heart.org/corporatefunding.

Source: American Heart Association

Can we predict aggressiveness of prostate cancer before surgery with a blood test?

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Now a new study from scientists in Milan has shown that for local prostate cancers treated with radical prostatectomy, you can preoperatively predict the aggressiveness of the prostatic disease, via a simple blood test.

When describing prostate cancer, urologists normally use the Gleason pattern, where a tissue sample from a biopsy is analysed to show much of the sample has been taken over by tumour cells. Gleason pattern 1 means that the cells in the tissue are normal, whereas Gleason pattern 5 (the highest score) indicates that the tissue is largely taken over by tumour cells. If a patient has Gleason pattern 5, then the predicted outcomes are poor.

Now a group of Italian researchers have been able to show that hypogonadism (which is low levels of the sex hormone testosterone) predicts that the patient will have a high Gleason score – which indicates a poor outcome after treatment.

A group led by Dr Marco Moschini (San Raffaele Hospital, Milan) retrospectively correlated hormone levels and Gleason scores in 1017 patients who underwent radical prostatectomy surgery at the San Raffaele hospital in Milan. 118 of the patients showed Gleason pattern 5. After adjusting for age, they found that the hypogonadism status and levels of sex-hormone-binding globulin (SHBG) was able to predict patients with Gleason pattern 5 (OR 1.79, p=0.025).

According to Marco Moschini

“We found that hypogonadism, and the levels of SHBG, were able to predict whether or not patients had Gleason factor 5, which is the worst Gleason score. This association will allow us to predict what the outcome will be before we decide to treat a patient with surgery. Potentially this can be helpful to identify patients with the most aggressive prostate cancer before surgery.

There is an urgent need for new research to uncover the role which hormones play in prostate cancer development.

What we don’t yet know is if this is an association, or if hypogonadism in some way increases the risk of developing high-grade prostate cancer. If this is the case, then it may be that treating the hypogonadism can lessen this risk, but we need more work before we can be sure of that”.

Commenting Professor Alexandre de la Taille (Paris) member of EAU Scientific Congress Committee, said: “Several reports in the literature mention that low serum testosterone level is associated with prostate cancer aggressiveness. This study highlights the fact that SHBG is also linked to high Gleason score. These cancers, developed in this special hormonal environment, are probably due to different molecular pathways and represent a new field to explore.”

(Note: the overall Gleason score is arrived at by adding together 2 samples to give a total score. In the worst case, Gleason 5 plus Gleason 5 would give an overall score of 10)

There was no external funding for this research.

Source: uroweb.org

10-minute urine test can measure specific compounds from food consumed

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Researchers at Georgetown Lombardi Comprehensive Cancer Center in Washington, DC, have developed a method that can quickly evaluate specific food compounds in human urine. They say their method could one day replace unreliable food logs used in population studies examining the effects of diet on cancer and will also help scientists accurately identify the most beneficial anticancer foods.

For their study, the researchers focused on cruciferous vegetables, which showed a protective benefit against lung cancer in a study of more than 63,000 people who participated in the National Institutes of Health’s Singapore Chinese Health Study. Cruciferous vegetables, a major food in the Asian diet, include cabbage, Brussels sprouts, broccoli, cauliflower, bok choy and watercress, among others.

“We know these foods are beneficial to health, and the ten-minute method we developed, which can test for the presence of specific compounds linked to these vegetables, will help researchers quantify exactly how much of these molecules are being consumed,” says the study’s lead author, Marcin Dyba, PhD, from Georgetown Lombardi. He’ll present the study’s findings Monday, April 18, at the annual meeting of the American Association for Cancer Research in New Orleans.

Dyba says the urine test will also allow scientists to figure out which compounds associated with cruciferous vegetables have the strongest link to cancer prevention. Those findings could then be tested in animal models, and if any of the molecules are found to be significantly protective against cancer, the information could lead to stronger dietary recommendations or to a dietary supplement, he says.

“We are very interested in understanding how and why the compounds work,” Dyba says. “You couldn’t do this work just using self-reported food logs.”

The Georgetown scientists validated the effectiveness of their tool using urine that was collected as part of the Singapore Chinese Health Study.

That study, which began in Singapore in 1993, was designed to look at the effect of diet on cancer and a number of other disorders. Researchers, led by Jian-Min Yuan, MD, PhD, from the University of Pittsburgh Cancer Institute and a co-author on this study, gave more than 63,000 middle- and older-aged residents of Singapore a detailed, 165-item quantitative food frequency questionnaire, and then followed them over several years through telephone calls. In 2005, about half of the study participants donated biospecimens, and studies examining urine donations found compounds from cruciferous vegetables that might be offering anti-cancer benefits.

The new urine test looks for specific members of the isothiocyanates (ITCs) family (among other compounds), found in cruciferous vegetables. Animal and cell studies have shown that different types of ITCs have varying anticancer properties and potency, suggesting they are not equal in protecting against cancer, Dyba says. “We developed our test because there has been no way to find out which specific ITCs works best,” he says.

The study’s senior author is Fung-Lung Chung, PhD, a professor of oncology at Georgetown Lombardi. Dyba is a research associate in Chung’s laboratory. In addition to Chung, Dyba and Yuan, Jennifer Adams-Haduch from the University of Pittsburgh is an author of the study.

No research funds were used for this study. Researchers report no conflicts of interest.

About Georgetown Lombardi Comprehensive Cancer Center

Georgetown Lombardi Comprehensive Cancer Center, part of Georgetown University Medical Center and MedStar Georgetown University Hospital, seeks to improve the diagnosis, treatment, and prevention of cancer through innovative basic and clinical research, patient care, community education and outreach, and the training of cancer specialists of the future. Georgetown Lombardi is one of only 45 comprehensive cancer centers in the nation, as designated by the National Cancer Institute (grant #P30 CA051008), and the only one in the Washington, DC area. For more information, go to http://lombardi.georgetown.edu.

About Georgetown University Medical Center

Georgetown University Medical Center (GUMC) is an internationally recognized academic medical center with a three-part mission of research, teaching and patient care (through MedStar Health). GUMC’s mission is carried out with a strong emphasis on public service and a dedication to the Catholic, Jesuit principle of cura personalis — or “care of the whole person.” The Medical Center includes the School of Medicine and the School of Nursing & Health Studies, both nationally ranked; Georgetown Lombardi Comprehensive Cancer Center, designated as a comprehensive cancer center by the National Cancer Institute; and the Biomedical Graduate Research Organization, which accounts for the majority of externally funded research at GUMC including a Clinical and Translational Science Award (UL1TR001409-01) from the National Institutes of Health.

Source: georgetown.edu

Why Science Needs to Publish Negative Results

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Many experimental results never see the light of publication day. For a large number of these, it comes down to the data being “negative”, i.e. the expected and/or wanted effect was not observed. A straightforward example might be the testing of a soil additive that is believed to help a plant grow. If the experiment outcome shows no difference between the standard soil and the soil with the additive, then the result will end up buried in the laboratory’s archive.

But is this really the best approach to scientific results?

Ignoring the vast information source that is negative results is troublesome in several ways. Firstly, it skews the scientific literature by only including chosen pieces of information. Secondly, it causes a huge waste of time and resources, as other scientists considering the same questions may perform the same experiments.

Furthermore, given that positive results are published, whereas negative data will struggle, it is extremely difficult to correct the scientific record for false positives; controversial studies that conflict with or cannot reproduce previously published studies are seldom given space in peer-reviewed journals.

Sometimes the argument is given that negative data “cannot be trusted”. But as was pointed out in the 2013 article “Trouble at the Lab” in The Economist, negative data are statistically more trustworthy than positive data.

Given that restrictions in publication space is becoming outdated in today’s world of digital information, it would be more efficient and un-biased if all results were made available to the interested scientific community. For the funding bodies this holds an additional benefit: a grant funding research that resulted in negative data would then still result in publications and shared information.

New Negatives in Plant Science – a pilot journal

To raise this important issue, and put the spotlight on negative and controversial data, the journal New Negatives in Plant Science was launched in 2014. It is an open access journal that publishes both research articles and commentaries. While there are other journals that welcome negative results, New Negatives in Plant Science aims to encourage and drive scientific debate by giving these studies a place of their own.

The editors, Dr. Thomas W. Okita of Washington State University and Dr. José A. Olivares of Los Alamos National Laboratory, point out that this information can be valuable to the scientific community in a number of ways, for example, by helping others to avoid repeating the same experiments as well as encouraging new hypothesis building.

Currently two Special Issues of the journal are being prepared; one on Controversial issues in Plant Carbohydrate Metabolism and one on Negative Data on Nutrient Use Efficiency in Plants.

Positive reactions

There have been a great number of positive reactions from the community around the launch of the journal. In a recent quiz on the journal’s homepage, many scientists explained why they thought negative and controversial results should be published for public consumption. A few of their comments are shown below. The winner of the journal’s quiz was awarded a travel grant to the Elsevier Current Opinion conference on Plant Genome Evolution. Thanks to all quiz participants for your contributions!

  • “Be bold, and simply let the world know what you ‘negatively‘ know.” Jickerson P. Lado
  • “It will bring openness to the scientific community and stimulate innovation.” Leonard Rusinamhodzi
  • “I would prefer to read negative as well as positive results in a very well-balanced way so that I can receive as much information as possible …” Saudan Singh

Author Biography

Emma Granqvist is a Publisher for plant sciences with Elsevier, and is based in Amsterdam. Originally from Stockholm, Sweden, Emma started her studies in biology at Lund University. Her main focus was molecular plant science, and she subsequently moved to the United Kingdom and studied at UEA (University of East Anglia) in Norwich. After finishing her PhD at the UK’s John Innes Centre, an independent research institute that focuses on plant and microbial sciences, Emma moved on to scientific publishing at Elsevier.

Source: Elsevier Sci Tech Connect

Small, Non-Coding RNA Controls Obesity-Induced Changes in Adipose Tissue

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Image Credit: www.sigmaaldrich.com

The microRNA, called miR-181b, controls adipose tissue vessels, making it responsible for obesity-related changes in those areas. In their study of mice, miR-181b expression was associated with a decrease in adipose tissue in endothelial cells but not in adipocytes. These results were observed after one week of mice being fed a high-fat diet.

miR-181b also directly targets a protein phosphatase called PHLPP2. Levels of this protein were found to be higher in endothelial cells from diabetic patients than from non-diabetic patients. Therefore, inhibiting PHLPP2 and boosting miR-181b expression are on the “to-do” list of the researchers involved in this study.

Scientists believe that they can rebuild the healthy levels of miR-181b of unhealthy people to decrease insulin resistance that causes and exacerbates diabetes. Initial successes are promising: scientists giving miR-181b injections saw improved insulin sensitivity, improved glucose levels, and reduced inflammation. The same results showed with PHLPP2 inhibition.

“The beneficial role of this microRNA in obesity is likely the tip of the iceberg since excessive inflammation is a pervasive finding in a wide-range of chronic inflammatory diseases,” said senior author Mark Feinberg, MD.

Source: LabRoots

The Elusive Blood Test for Depression

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In the 30 years since Prozac first hit the U.S. market, antidepressants have revolutionized modern treatments for major depressive disorder, while screening for depression has remained largely unchanged.

To diagnose depression, healthcare providers still rely primarily on patient responses to questions based on criteria from the Diagnostic and Statistical Manual of Mental Disorders. Even after a recent update, these criteria have lower diagnostic reliability than those for almost any other psychiatric disorder. This is a serious shortcoming given that, according to the World Health Organization, depression is the number one cause of disability worldwide, and also in light of the recent recommendation from the U.S. Preventive Services Task Force that primary care providers should screen all adults for this condition.

Could a biomarker-based assay improve diagnosis and help lighten the global burden of depression? A string of promising but ultimately unsuccessful studies on single biomarkers for depression has left many psychiatrists highly skeptical about the feasibility of such a test. Other experts, however, believe that a recent shift toward studying multi-biomarker panels that reflect depression’s true complexity could become an unexpected breakthrough for certain patient populations.

When Statistical Powers Combine

Researchers have found numerous biomarkers associated with depression, but the statistical significance of each of these in isolation has not been strong enough to make a diagnosis, according to Richard Shelton, MD, Charles B. Ireland Professor and vice chair of research in the department of psychiatry at the University of Alabama at Birmingham School of Medicine. By combining the results from measuring many of these analytes, however, scientists are beginning to create tests that could potentially wield real predictive power.

Shelton collaborated with one of the first research teams in the field to move away from single biomarkers and pioneer a probabilistic approach in a pair of studies led by John Bilello, PhD, chief scientific officer of Ridge Diagnostics, and George Papakostas, MD, associate professor of psychiatry at Harvard Medical School. In a combined pilot (n = 79) and replication (n = 77) study and a larger follow-up confirmation study (n = 154), this research team showed that a panel of nine serum biomarkers and a prediction algorithm could differentiate between depressed and non-depressed individuals (Mol Psychiatry 2013;18:332–9 and J Clin Psychiatry 2015;76:e199–206).

Known as MDDScore, the test demonstrated a sensitivity and specificity both >90%, and holds the distinction of being one of the few biomarker-based assays for depression whose effectiveness has been validated in a replication study. The nine biomarkers it measures are associated with changes observed during major depression that take place in the neurotrophic, metabolic, inflammatory, and ­hypothalamic-pituitary-adrenal axis pathways. Using the pattern of these biomarkers’ concentrations as well as body-mass index, the algorithm then calculates a score on a scale of 1 to 9 that is adjusted for sex indicating the probability that a patient has depression.

Ridge Diagnostics currently offers MDDScore through its CLIA-certified laboratory. The company also continues to collect data on the test’s performance in the more than 4,000 patients it has been used for so far. However, according to Bilello, because the test is used to aid clinicians in making a diagnosis and not as a definitive diagnostic, the company has chosen not to seek Food and Drug Administration (FDA) approval for now. “Eventually we might want to do that, but it wasn’t as important as getting the test out there to healthcare professionals who needed the support,” said Bilello.

The Challenge of Comorbid Conditions

As depression researchers embrace multianalyte panels, they still face hurdles on the road to developing an FDA approved test that clinical labs across the country could use. The most significant of these, according to Shelton, is creating a test that performs well, not just in research samples, but in depressed patients seen in clinical settings. Most biomarker investigations study patients who are depressed but otherwise healthy. In reality, however, patients with major depressive disorder often have comorbid conditions that could interfere with test results.

“Patients have elevations of certain inflammatory biomarkers in depression, but they also have elevation of those same inflammatory biomarkers in heart disease, diabetes, and connective diseases like lupus,” Shelton said. “So researchers and clinicians can’t really take those as primary biomarkers.”

While both published studies on MDDScore were conducted in somewhat restricted patient populations, Bilello said that Ridge Diagnostics has gone on to evaluate the test in patients with comorbidities such as chronic pain and intends to further validate it in populations with other conditions such as HIV infection.

Shelton’s own work on depression biomarkers at the University of Alabama has involved broadly inclusive populations. As he explains it, however, designing studies with representative patient samples can present a catch-22. Many times, these depression biomarker studies are performed by small biotech companies that don’t have a lot of money and only get one shot at success. If their first attempt to validate a test fails because they used a broad patient sample, they probably won’t get the funding for additional studies.

Notes From the Field

If and when FDA approves a test for depression, the ultimate question is, will it be useful? By looking at how healthcare providers have received MDDScore, one can get a glimpse of how a more widespread test might be implemented in clinical practice.

Interestingly, healthcare providers report that MDDScore has helped with a surprising patient management issue that is not unusual in primary care. When patients are clearly depressed but in denial about it, clinicians have discovered that an MDDScore result indicative of depression can help convince patients to accept treatment. “By the time somebody gets kicked to see me, they have already committed to coming to see a psychiatrist,” Shelton said. “But in the primary care environment, because of the stigma associated with mental illness, some people just do not want to accept the diagnosis.”

Though MDDScore has proven useful in primary care, Shelton does not use it and feels a biomarker-based test would not add to his practice as a psychiatrist. In contrast, other psychiatrists have told Bilello that when patients want to stop their medication prematurely, they’ve found that a high MDDScore result can dissuade them. Bilello also envisions that MDDScore will help identify depression in adolescents and the elderly, two populations that might not communicate their internal states as accurately as adults in their prime.

Critics have charged that at $800 a pop, MDDScore isn’t cost-effective. Speaking about biomarker-based tests for depression in general, however, Ramin Parsey, MD, PhD, begged to differ on the claim that they are not worth their potentially hefty price tags. “People say, ‘well, we would never spend $1,000 for a depression test,’” said Parsey, who is chair of the department of psychiatry and director of PET Research at Stony Brook University School of Medicine in Stony Brook, New York. “But we spend thousands of dollars on certain tests for cancer. And the truth is that depression is just as devastating if you look at the statistics.”

As for how laboratory medicine professionals might be affected when tests for depression and other mood disorders lift off, Mark Frye, MD, said they likely will play a central role in ensuring that results are accurate. “Clinical labs are going to be critical in this process,” said Frye, who is chair of the department of psychiatry and psychology at Mayo Clinic in Rochester, Minnesota. “We are really going to rely on the lab to recognize the importance of standardization of the assays.”

The Holy Grail of Mood Disorder Testing

Beyond improving depression diagnosis, biomarker-based tests also could distinguish patients with major depressive disorder from those who have bipolar disorder and are experiencing a depressive episode—something that experts describe as the Holy Grail of mood disorder testing. The great need for such a test stems from the fact that bipolar disorder is treated with mood stabilizers, a completely different class of medications from antidepressants. If antidepressants are given to a bipolar patient, they can actually make the illness worse.

While bipolar disorder biomarkers have proved as elusive as those for depression, a recent study (n = 288) by researchers from the Mayo Clinic in Rochester, Minnesota used proteomic profiling to identify six inflammatory and immune-mediated serum proteins that distinguish bipolar I/II and major depression patients from healthy individuals (Transl Psychiatry 2015;5:e689). Three of these proteins differentiated bipolar I patients, not just from healthy controls, but also from the patients with major depression.

Author: Christine DeLong

Mark Frye, MD, the paper’s first author and chair of the department of psychiatry and psychology at Mayo, wrote that these preliminary results “support the possibility of developing a diagnostic test using the discovered biomarkers,” though further investigation is needed to validate them. “Our conclusion from this work is very intriguing,” Frye told CLN. “What we need to do now are larger studies and replications and those studies are now going forward.”

Source: AACC

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